Phylogenetic systematics of precious coral

 
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 Japanese red, white, and pink corals and Mediterranean red coral are widely used as gemstones but they were not well understood genealogically and taxonomically. This study attempted to solve the problem from the perspective of mitochondrial DNA sequences (alignment of A, C, G and T in mitochondrial genome). The mitochondrial genomes of red and white corals were composed of roughly 18,900 DNA base pairs (Fig. 1). In Fig. 1, the gene arrangements of the two corals are also shown. They are largely different, indicating that the two corals are distinctly different in the taxonomic classification. Then, using the nucleotide sequences, a phylogenic tree was constructed to see how precious corals and their closely related species are related (Fig. 2), and how precious corals themselves, having phylogenic affinities, are related (Fig. 3). The study revealed that precious corals are divided unambiguously into two groups: red coral and Mediterranean red coral as one while white coral and pink coral as the other. (Tomohiko Suzuki of Kochi University)

 

[Reference]
Uda, K., Komeda, Y., Fujita, T., Iwasaki, N., Bavestrello, G., Giovine, M., Cattaneo-Vietti, R. and Suzuki, T., 2013. Complete mitochondrial genomes of the Japanese pink coral (Corallium elatius) and the Mediterranean red coral (Corallium rubrum): A reevaluation of the phylogeny of the family Coralliidae based on molecular data. Comparative Biochemistry and Physiology Part D, 8, 209-219.
Uda. K., Komeda. Y., Koyama. H., Koga. K., Fujita. T., Iwasaki. N. and Suzuki. T., 2011. Complete mitochondrial genomes of two Japanese precious corals. Paracorallium japonicum and Corallium konojoi (Cnidaria. Octocorallia. Coralliidae): Notable differences in gene arrangement. Gene, 476. 27-37.

Fig. 1


Fig. 1. Mitochondrial genome map of Japanese red coral, Paracorallium japonicum (left) and white coral, Corallium konojoi (right): They differ substantially in gene arrangement. Mediterranean red coral, C. ruburum and Japanese red coral have identical gene sequences while pink, C. elatius and white corals have identical gene sequences.
   
Fig. 2
Fig. 2. Phylogenic tree constructed from mitochondrial DNA sequences: Mediterranean red coral, Corallium rubrum and Japanese red coral, Paracorallium japonicum form one cluster while pink coral, C. elatius and white coral, C. konojoi the other cluster. This indicates that precious corals are divided broadly into two groups although they are not included in this figure.


 
 
Fig. 3
Fig. 3. Phylogenic tree of precious corals based on the mitochondrial msh1 and nad4 genes